70 publications

2020

• Beall, C. M., Lucero, D., Hill, T. C., DeMott, P. J., Stokes, M. D., & Prather, K. A. (2020). Best practices for precipitation sample storage for offline studies of ice nucleation in marine and coastal environments. Atmospheric Measurement Techniques, 13(12), 6473-6486. doi: 10.5194/amt-13-6473-2020
• Stokes, M. D., Leichter, J. J., & Wing, S. R. (2020). Spatial variations in the stable isotope composition of the benthic algae, Halimeda tuna, and implications for paleothermometry. Scientific Reports, 10(1). doi: 10.1038/s41598-020-73283-x
• Wing, S. R., Wing, L. C., O'Connell-Milne, S. A., Barr, D., Stokes, D., Genovese, S., & Leichter, J. J. (2020). Penguins and seals transport limiting nutrients between offshore pelagic and coastal regions of Antarctica under changing sea ice. Ecosystems. doi: 10.1007/s10021-020-00578-5

2018

• Wing, S. R., Leichter, J. J., Wing, L. C., Stokes, D., Genovese, S. J., McMullin, R. M., & Shatova, O. A. (2018). Contribution of sea ice microbial production to Antarctic benthic communities is driven by sea ice dynamics and composition of functional guilds. Global Change Biology, 24(8), 3642-3653. doi: 10.1111/gcb.14291
• Forestieri, S. D., Moore, K. A., Borrero, R. M., Wang, A., Stokes, M. D., & Cappa, C. D. (2018). Temperature and Composition Dependence of Sea Spray Aerosol Production. Geophysical Research Letters, 45(14), 7218-7225. doi: 10.1029/2018gl078193
• Elliott, S., Burrows, S., Cameron-Smith, P., Hoffman, F., Hunke, E., Jeffery, N., ... Wingenter, O. (2018). Does marine surface tension have global biogeography? Addition for the OCEANFILMS package. Atmosphere, 9(6). doi: 10.3390/atmos9060216

2017

• Callaghan, A. H., Deane, G. B., & Stokes, M. D. (2017). On the imprint of surfactant-driven stabilization of laboratory breaking wave foam with comparison to oceanic whitecaps. Journal of Geophysical Research-Oceans, 122(8), 6110-6128. doi: 10.1002/2017jc012809
• Wang, X. F., Deane, G. B., Moore, K. A., Ryder, O. S., Stokes, M. D., Beall, C. M., ... Prather, K. A. (2017). The role of jet and film drops in controlling the mixing state of submicron sea spray aerosol particles. Proceedings of the National Academy of Sciences of the United States of America, 114(27), 6978-6983. doi: 10.1073/pnas.1702420114
• Beall, C. M., Stokes, M. D., Hill, T. C., DeMott, P. J., DeWald, J. T., DeWald, J. T., & Prather, K. A. (2017). Automation and heat transfer characterization of immersion mode spectroscopy for analysis of ice nucleating particles. Atmospheric Measurement Techniques, 10(7), 2613-2626. doi: 10.5194/amt-10-2613-2017

2016

• Callaghan, A. H., Deane, G. B., & Stokes, M. D. (2016). Laboratory air-entraining breaking waves: Imaging visible foam signatures to estimate energy dissipation. Geophysical Research Letters, 43(21), 11320-11328. doi: 10.1002/2016gl071226
• Stokes, M. D., Deane, G., Collins, D. B., Cappa, C., Bertram, T., Dommer, A., ... Survilo, M. (2016). A miniature Marine Aerosol Reference Tank (miniMART) as a compact breaking wave analogue. Atmospheric Measurement Techniques, 9(9), 4257-4267. doi: 10.5194/amt-9-4257-2016
• DeMott, P. J., Hill, T. C. J., McCluskey, C. S., Prather, K. A., Collins, D. B., Sullivan, R. C., ... Franc, G. D. (2016). Sea spray aerosol as a unique source of ice nucleating particles. Proceedings of the National Academy of Sciences of the United States of America, 113(21), 5797-5803. doi: 10.1073/pnas.1514034112
• Deane, G. B., Stokes, M. D., & Callaghan, A. H. (2016). The saturation of fluid turbulence in breaking laboratory waves and implications for whitecaps. Journal of Physical Oceanography, 46(3), 975-992. doi: 10.1175/jpo-d-14-0187.1
• Deane, G. B., Stokes, M. D., & Latz, M. I. (2016). Bubble stimulation efficiency of dinoflagellate bioluminescence. Luminescence, 31(1), 270-280. doi: 10.1002/bio.2957
• Brady, J. M., Stokes, M. D., Bonnardel, J., & Bertram, T. H. (2016). Characterization of a quadrotor unmanned aircraft system for aerosol-particle-concentration measurements. Environmental Science & Technology, 50(3), 1376-1383. doi: 10.1021/acs.est.5b05320

2015

• Jean, C. B., Kyser, T. K., James, N. P., & Stokes, M. D. (2015). The antarctic brachiopod Liothyrella uva as a proxy for ambient oceanographic conditions at McMurdo Sound. Journal of Sedimentary Research, 85(12), 1492-1509. doi: 10.2110/jsr.2015.94
• Lee, C., Sultana, C. M., Collins, D. B., Santander, M. V., Axson, J. L., Malfatti, F., ... Prather, K. A. (2015). Advancing model systems for fundamental laboratory studies of sea spray aerosol using the microbial loop. Journal of Physical Chemistry A, 119(33), 8860-8870. doi: 10.1021/acs.jpca.5b03488

2014

• Callaghan, A. H., Stokes, M. D., & Deane, G. B. (2014). The effect of water temperature on air entrainment, bubble plumes, and surface foam in a laboratory breaking-wave analog. Journal of Geophysical Research-Oceans, 119(11), 7463-7482. doi: 10.1002/2014jc010351
• Collins, D. B., Zhao, D. F., Ruppel, M. J., Laskina, O., Grandquist, J. R., Modini, R. L., ... Prather, K. A. (2014). Direct aerosol chemical composition measurements to evaluate the physicochemical differences between controlled sea spray aerosol generation schemes. Atmospheric Measurement Techniques, 7(11), 3667-3683. doi: 10.5194/amt-7-3667-2014
• Leichter, J. J., Stokes, M. D., Vilchis, L. I., & Fiechter, J. (2014). Regional synchrony of temperature variation and internal wave forcing along the Florida Keys reef tract. Journal of Geophysical Research-Oceans, 119(1), 548-558. doi: 10.1002/2013jc009371

2013

• Dunlop, R. A., Cato, D. H., Noad, M. J., & Stokes, D. M. (2013). Source levels of social sounds in migrating humpback whales (Megaptera novaeangliae). Journal of the Acoustical Society of America, 134(1), 706-714. doi: 10.1121/1.4807828
• Callaghan, A. H., Deane, G. B., & Stokes, M. D. (2013). Two regimes of laboratory whitecap foam decay: Bubble-plume controlled and surfactant stabilized. Journal of Physical Oceanography, 43(6), 1114-1126. doi: 10.1175/jpo-d-12-0148.1
• Jin, K., Klima, J. C., Deane, G., Dale Stokes, M., & Latz, M. I. (2013). Pharmacological investigation of the bioluminescence signaling pathway of the dinoflagellate Lingulodinium polyedrum: evidence for the role of stretch-activated ion channels. Journal of Phycology, 49(4), 733-745. doi: 10.1111/jpy.12084
• Prather, K. A., Bertram, T. H., Grassian, V. H., Deane, G. B., Stokes, M. D., DeMott, P. J., ... Zhao, D. F. (2013). Bringing the ocean into the laboratory to probe the chemical complexity of sea spray aerosol. Proceedings of the National Academy of Sciences of the United States of America, 110(19), 7550-7555. doi: 10.1073/pnas.1300262110
• Stokes, M. D., Deane, G. B., Prather, K., Bertram, T. H., Ruppel, M. J., Ryder, O. S., ... Zhao, D. (2013). A Marine Aerosol Reference Tank system as a breaking wave analogue for the production of foam and sea-spray aerosols. Atmospheric Measurement Techniques, 6(4), 1085-1094. doi: 10.5194/amt-6-1085-2013
• Dunlop, R. A., Noad, M. J., Cato, D. H., Kniest, E., Miller, P. J. O., Smith, J. N., & Stokes, M. D. (2013). Multivariate analysis of behavioural response experiments in humpback whales (Megaptera novaeangliae). Journal of Experimental Biology, 216(5), 759-770. doi: 10.1242/jeb.071498
• Modini, R. L., Russell, L. M., Deane, G. B., & Stokes, M. D. (2013). Effect of soluble surfactant on bubble persistence and bubble-produced aerosol particles. Journal of Geophysical Research-Atmospheres, 118(3), 1388-1400. doi: 10.1002/jgrd.50186

2012

• Deane, G. B., Preisig, J. C., Tindle, C. T., Lavery, A., & Stokes, M. D. (2012). Deterministic forward scatter from surface gravity waves. The Journal of the Acoustical Society of America, 132(6), 3673-3686. doi: 10.1121/1.4763996
• Callaghan, A. H., Deane, G. B., Stokes, M. D., & Ward, B. (2012). Observed variation in the decay time of oceanic whitecap foam. Journal of Geophysical Research-Oceans, 117(C09015). doi: 10.1029/2012jc008147
• Leichter, J. J., Stokes, M. D., Hench, J. L., Witting, J., & Washburn, L. (2012). The island-scale internal wave climate of Moorea, French Polynesia. Journal of Geophysical Research-Oceans, 117(C06008). doi: 10.1029/2012jc007949

2011

• Slattery, M., Lesser, M. P., Brazeau, D., Stokes, M. D., & Leichter, J. J. (2011). Connectivity and stability of mesophotic coral reefs. Journal of Experimental Marine Biology and Ecology, 408(1-2), 32-41. doi: 10.1016/j.jembe.2011.07.024
• Stokes, M. D., Leichter, J. J., Wing, S., & Frew, R. (2011). Temperature variability and algal isotopic heterogeneity on a Floridian coral reef. Marine Ecology-an Evolutionary Perspective, 32(3), 364-379. doi: 10.1111/j.1439-0485.2011.00469.x

2010

• Deane, G. B., & Stokes, M. D. (2010). Model calculations of the underwater noise of breaking waves and comparison with experiment. Journal of the Acoustical Society of America, 127(6), 3394-3410. doi: 10.1121/1.3419774
• Stokes, M. D., Leichter, J. J., & Genovese, S. J. (2010). Long-term declines in coral cover at Bonaire, Netherlands Antilles. Atoll Research Bulletin, 582, 1-22.

2009

• Stokes, M. D., & Deane, G. B. (2009). Automated processing of coral reef benthic images. Limnology and Oceanography-Methods, 7, 157-168.

2008

• Deane, G. B., & Stokes, M. D. (2008). The acoustic excitation of air bubbles fragmenting in sheared flow. Journal of the Acoustical Society of America, 124(6), 3450-3463. doi: 10.1121/1.3003076
• Miksis-Olds, J. L., Buck, J. R., Noad, M. J., Cato, D. H., & Stokes, M. D. (2008). Information theory analysis of Australian humpback whale song. Journal of the Acoustical Society of America, 124(4), 2385-2393. doi: 10.1121/1.2967863
• Callaghan, A. H., Deane, G. B., & Stokes, M. D. (2008). Observed physical and environmental causes of scatter in whitecap coverage values in a fetch-limited coastal zone. Journal of Geophysical Research-Oceans, 113(C5). doi: 10.1029/2007jc004453
• Leichter, J. J., Stokes, M. D., & Genovese, S. J. (2008). Deep water macroalgal communities adjacent to the Florida Keys reef tract. Marine Ecology-Progress Series, 356, 123-138. doi: 10.3354/meps07230

2007

• Dunlop, R. A., Noad, M. J., Cato, D. H., & Stokes, D. (2007). The social vocalization repertoire of east Australian migrating humpback whales (Megaptera novaeangliae). Journal of the Acoustical Society of America, 122(5), 2893-2905. doi: 10.1121/1.2783115

2006

• Deane, G. B., & Stokes, M. D. (2006). The acoustic signature of bubbles fragmenting in sheared flow. Journal of the Acoustical Society of America, 120(6), EL84-EL89. doi: 10.1121/1.2364466
• Cockell, C. S., & Stokes, M. D. (2006). Hypolithic colonization of opaque rocks in the Arctic and Antarctic Polar Desert. Arctic Antarctic and Alpine Research, 38(3), 335-342. doi: 10.1657/1523-0430(2006)38[335:hcoori]2.0.co;2
• Thode, A. M., Gerstoft, P., Burgess, W. C., Sabra, K. G., Guerra, M., Stokes, M. D., ... Cato, D. H. (2006). A portable matched-field processing system using passive acoustic time synchronization. IEEE Journal of Oceanic Engineering, 31(3), 696-710. doi: 10.1109/joe.2006.880431

2005

• Deane, G. B., & Stokes, M. D. (2005). A quantitative model for flow-induced bioluminescence in dinoflagellates. Journal of Theoretical Biology, 237(2), 147-169. doi: 10.1016/j.jtbi.2005.04.002
• Leichter, J. J., Deane, G. B., & Stokes, M. D. (2005). Spatial and temporal variability of internal wave forcing on a coral reef. Journal of Physical Oceanography, 35(11), 1945-1962. doi: 10.1175/jpo2808.1

2004

• Cockell, C. S., & Stokes, M. D. (2004). Ecology - Widespread colonization by polar hypoliths. Nature, 431(7007), 414-414. doi: 10.1038/431414a
• Stokes, M. D., Deane, G. B., Latz, M. I., & Rohr, J. (2004). Bioluminescence imaging of wave-induced turbulence. Journal of Geophysical Research-Oceans, 109(C1). doi: 10.1029/2003jc001871

2003

• Cockell, C. S., Rettberg, P., Horneck, G., Scherer, K., & Stokes, M. D. (2003). Measurements of microbial protection from ultraviolet radiation in polar terrestrial microhabitats. Polar Biology, 26(1), 62-69. doi: 10.1007/s00300-002-0438-z
• Denny, M. W., Miller, L. P., Stokes, M. D., Hunt, L. J. H., & Helmuth, B. S. T. (2003). Extreme water velocities: Topographical amplification of wave-induced flow in the surf zone of rocky shores. Limnology and Oceanography, 48(1), 1-8.

2002

• Cockell, C. S., White, D., Messier, D., & Stokes, M. D. (2002). Fostering links between environmental and space exploration: the Earth and Space Foundation. Space Policy, 18(4), 301-306. doi: 10.1016/s0265-9646(02)00043-7
• Deane, G. B., & Stokes, M. D. (2002). Scale dependence of bubble creation mechanisms in breaking waves. Nature, 418(6900), 839-844. doi: 10.1038/nature00967
• Deane, G. B., & Stokes, M. D. (2002). A robust single-cable sensor array for oceanographic use. IEEE Journal of Oceanic Engineering, 27(3), 760-767. doi: 10.1109/joe.2002.1040957
• Stokes, M. D. (2002). A simple buoyant craft for autonomous exploration. Acta Astronautica, 50(3), 167-172. doi: 10.1016/s0094-5765(01)00149-7
• Stokes, M. D., Deane, G. B., Vagle, V., & Farmer, D. (2002). Measurements of large bubbles in open-ocean whitecaps. Gas transfer at water surfaces (pp. 279-284). Washington, DC: American Geophysical Union.

2001

• Schubert, M., Holland, L. Z., Stokes, M. D., & Holland, N. D. (2001). Three amphioxus Wnt genes (AmphiWnt3, AmphiWnt5, and AmphiWnt6) associated with the tail bud: The evolution of somitogenesis in chordates. Developmental Biology, 240(1), 262-273. doi: 10.1006/dbio.2001.0460
• Cockell, C. S., Lee, P., Schuerger, A. C., Hidalgo, L., Jones, J. A., & Stokes, M. D. (2001). Microbiology and vegetation of micro-oases and polar desert, Haughton impact crater, Devon Island, Nunavut, Canada. Arctic Antarctic and Alpine Research, 33(3), 306-318. doi: 10.2307/1552238

1999

• Stokes, M. D., & Deane, G. B. (1999). A new optical instrument for the study of bubbles at high void fractions within breaking waves. IEEE Journal of Oceanic Engineering, 24(3), 300-311. doi: 10.1109/48.775292
• Deane, G. B., & Stokes, M. D. (1999). Air entrainment processes and bubble size distributions in the surf zone. Journal of Physical Oceanography, 29(7), 1393-1403. doi: 10.1175/1520-0485(1999)029<1393:aepabs>2.0.co;2
• Cockell, C. S., Stokes, M. D., & Korsmeyer, K. E. (1999). Overwintering strategies of Antarctic organisms. Environmental Reviews, 8(1), 1-19. doi: 10.1139/a00-001
• Cockell, C. S., & Stokes, M. D. (1999). Polar winter: A biological model for impact events and related dark/cold climatic changes. Climatic Change, 41(2), 151-173. doi: 10.1023/a:1005465513592
• Stokes, M. D., & Somero, G. N. (1999). An optical oxygen sensor and reaction vessel for high-pressure applications. Limnology and Oceanography, 44(1), 189-195.

1998

• Stokes, M. D., & Holland, N. D. (1998). The lancelet. American Scientist, 86(6), 552-560. doi: 10.1511/1998.43.799
• Stokes, M. D. (1998). Cephalochordata. Encyclopedia of reproduction Vol. 1, A-En (pp. 529-535). San Diego: Academic Press.

1997

• Stokes, M. D. (1997). Larval locomotion of the lancelet Branchiostoma floridae. Journal of Experimental Biology, 200(11), 1661-1680.

1996

• Stokes, M. D. (1996). Larval settlement, post-settlement growth and secondary production of the Florida lancelet (= Amphioxus) Branchiostoma floridae. Marine Ecology-Progress Series, 130(1-3), 71-84. doi: 10.3354/meps130071
• Stokes, M. D., & Holland, N. D. (1996). Reproduction of the Florida lancelet (Branchiostoma floridae): Spawning patterns and fluctuations in gonad indexes and nutritional reserves. Invertebrate Biology, 115(4), 349-359. doi: 10.2307/3227024
• Stokes, M. D., Stewart, B., & Epel, D. (1996). The kinetics of the cortical reaction and respiratory burst following fertilization of Sterechinus neumayeri eggs. Antarctic Journal of the United States, 31, 119-120.

1995

• Stokes, M. D., & Holland, N. D. (1995). Ciliary hovering in larval lancelets (=Amphioxus). Biological Bulletin, 188(3), 231-233. doi: 10.2307/1542300
• Stokes, M. D., & Holland, N. D. (1995). Embryos and larvae of a lancelet, Branchiostoma floridae, from hatching through metamorphosis: Growth in the laboratory and external morphology. Acta Zoologica, 76(2), 105-120.

1992

• Stokes, M. D., & Holland, N. D. (1992). Southern stingray (Dasyatis americana) feeding on lancelets (Branchiostoma floridae). Journal of Fish Biology, 41(6), 1043-1044. doi: 10.1111/j.1095-8649.1992.tb02732.x